Stars
CLI tool to automate docker image updates. Interactive or unattended with notifications, image backups, autoprune, no pre-pulling and more.
Self hosted FLOSS fitness/workout, nutrition and weight tracker
Penpot: The open-source design platform for Product teams that need scalable collaboration.
Privacy first, AI meeting assistant with 4x faster Parakeet/Whisper live transcription, speaker diarization, and Ollama summarization built on Rust. 100% local processing. no cloud required. Meetil…
DTAtools - Tools for handling data from data transfer agreements (DTAs) / data transfer specifications (DTS)
Data Science Operations (dso) command line tool
Data Science Operations (dso) companion R package
Classify output of AmpliconArchitect to detect types of focal amplifications present
Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.
A method for circular DNA detection based on probabilistic mapping of ultrashort reads
Bayesian mixture models for estimating and clustering cancer cell fractions
AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and elucidates the architecture of the amplicon. In the current …