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Disease Mechanisms KB

HTML 20 5 Updated May 1, 2026

Run OpenClaw more securely inside NVIDIA OpenShell with managed inference

TypeScript 19,996 2,546 Updated May 1, 2026

Automation engine to build, test and ship any codebase. Runs locally, in CI, or directly in the cloud

Go 15,752 863 Updated Apr 30, 2026

Biomni: a general-purpose biomedical AI agent

Python 3,032 565 Updated Apr 27, 2026

litemind is a Python library designed to empower developers to build sophisticated conversational agents and tools. It provides a flexible and elegant API for interacting with Large Language Models…

Python 18 4 Updated Apr 5, 2026

Trends in single cell papers

Jupyter Notebook 17 Updated Sep 23, 2024

This project aims to extract text from PDF files using the outputs generated by the pdf-document-layout-analysis service. By leveraging the segmentation and classification capabilities of the under…

Makefile 38 4 Updated Feb 3, 2025

framework and guidelines for the many ways of doing OSS in science

2 1 Updated Sep 26, 2024

Fast citation reference parsing

Ruby 1,231 101 Updated May 11, 2025

A reactive notebook for Python — run reproducible experiments, query with SQL, execute as a script, deploy as an app, and version with git. Stored as pure Python. All in a modern, AI-native editor.

Python 20,720 1,062 Updated Apr 30, 2026

library supporting NLP and CV research on scientific papers

Python 795 65 Updated Nov 8, 2024

High accuracy RAG for answering questions from scientific documents with citations

Python 8,433 857 Updated Mar 20, 2026

Convert documents to structured data effortlessly. Unstructured is open-source ETL solution for transforming complex documents into clean, structured formats for language models. Visit our website …

HTML 14,602 1,226 Updated Apr 29, 2026

LlamaIndex is the leading document agent and OCR platform

Python 49,064 7,337 Updated Apr 30, 2026

Tools for curating biomedical training data for large-scale language modeling

Python 498 120 Updated Dec 9, 2024

The agent engineering platform

Python 135,510 22,392 Updated Apr 30, 2026

Table to Wikidata Mapping Language

TypeScript 27 11 Updated Feb 3, 2023

Happy Path Deployment Tool

Go 19 3 Updated Feb 10, 2026

NextJS version of Material Kit React by Creative Tim

JavaScript 361 642 Updated Aug 19, 2024

A unified framework for machine learning with time series

Python 9,748 2,163 Updated Apr 30, 2026

Mondo Disease Ontology

Jupyter Notebook 300 66 Updated May 1, 2026

Function for un- and re- doing the conversion from .ipynb ipython notebook to .py python file which Databricks performs every time it exports a notebook.

Python 17 7 Updated Nov 30, 2022
JavaScript 46 7 Updated Jun 12, 2022

Open Source Code for Extraction of Methods and Datasets from Biomedical Papers

Python 1 Updated Mar 2, 2022

Machine learning to text-mine coronavirus research for CoronaCentral.ai

Python 11 2 Updated Jan 10, 2024

Multi-label aviation safety narratives classification

Jupyter Notebook 15 6 Updated Jan 29, 2023

Use fastai-v2 with HuggingFace's pretrained transformers

Jupyter Notebook 110 19 Updated Sep 25, 2020

Extraction Toolkit

HTML 83 48 Updated Nov 18, 2021

Knowledge Graph Toolkit

Jupyter Notebook 417 62 Updated Jun 25, 2025

The fastai book, published as Jupyter Notebooks

Jupyter Notebook 24,915 9,455 Updated Aug 16, 2024
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