Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads

Biological foundation modeling from molecular to genome scale

Using R language in microbiome analysis

AutoGPT is the vision of accessible AI for everyone, to use and to build on. Our mission is to provide the tools, so that you can focus on what matters.

Microbial analysis in TCGA data

bwa-mem2

RNA-seq aligner

A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations

HUMAnN is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).

Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for CAZymes.

QIIME 2中文文档(QIIME 2 Chinese Manual)

bioBakery tools for meta'omic profiling

Metagenome analysis pipeline

QIIME 2中文文档(QIIME 2 Chinese Manual)

Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tests

Rachis Framework (Formerly Known as QIIME 2 Framework (Q2F))

SRA Tools

Code, unit tests, and tutorials for running PICRUSt2