HoffLab
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biobakerymgx
biobakerymgx PublicRead-preprocessing, taxonomic classification, functional classification, strain analysis, and pangenome analysis using bioBakery tools
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caganalyzer
caganalyzer PublicA pipeline for identifying and analyzing co-abundant gene clusters (CAGs) in microbiome studies
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bactopia
bactopia PublicForked from bactopia/bactopia
A flexible pipeline for complete analysis of bacterial genomes
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Repositories
- phageannotator Public
- SaIsolates Public
- bactopia Public Forked from bactopia/bactopia
A flexible pipeline for complete analysis of bacterial genomes
- biobakerymgx Public
Read-preprocessing, taxonomic classification, functional classification, strain analysis, and pangenome analysis using bioBakery tools
- caganalyzer Public
A pipeline for identifying and analyzing co-abundant gene clusters (CAGs) in microbiome studies
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