Stars
Lean formalization of bounded gaps between primes
Fast indexing and search of discontinuous motifs in protein structures
Turn Claude Code into its own Meta-Harness — a skill that evolves the scaffolding around a fixed model (memory, retrieval, context, prompts) via a native propose→score→Pareto loop. Native reimpleme…
A high performance drop-in replacement for Biotite's PDBFile.
PINDER: The Protein INteraction Dataset and Evaluation Resource
MMseqs2: ultra fast and sensitive search and clustering suite
Codex Autoresearch Skill — A self-directed iterative system for Codex that continuously cycles through: modify, verify, retain or discard, and repeat indefinitely. Inspired by Karpathy’s autoresear…
Antibody Numbering and Antigen Receptor ClassIfication
AI-powered biologics design campaign agent — multi-agent orchestration with BoltzGen, PXDesign, Protenix, and 200+ cloud tools. Antibodies, nanobodies, de novo binders, and beyond.
Protein reasoning foundation models for drug discovery.
OpenMMLab Pose Estimation Toolbox and Benchmark.
AI agents running research on single-GPU nanochat training automatically
Origin-1: a generative AI platform for de novo antibody design against novel epitopes
Artisan-based protein design pipeline for phosphopeptide binder experiments and autoresearch.
Turn any AI agent into an AI Scientist. The #1 Agent Skills library for science, used by 175,000+ scientists worldwide. 163 ready-to-use validated skills plus 100+ scientific databases covering bio…
Collect, aggregate, and visualize a data ecosystem's metadata
Toward High-Accuracy Open-Source Biomolecular Structure Prediction.
Control PyMOL with natural language prompts using an LLM to make better figures, analyze structures, and more...
Open source code for AlphaFold 2.
A tool for spatially-aware molecule design and optimisation via Equivariant Diffusion and GCN
Terminal-based plasmid map viewer, sequence editor, and cloning/mutagenesis workbench in pure Python
Local UI to run and train LLMs and diffusion models, including Qwen3.8, Kimi K3, MiniMax-H3, Gemma 4, DeepSeek-V4, FLUX and more.
A minimal PyTorch re-implementation of AlphaFold2's model & training
BioReason-Pro: Advancing Protein Function Prediction with Multimodal Biological Reasoning
It's a package for evaluation of predicted poses, right?