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A community-supported supercharged document management system: scan, index and archive all your documents

Python 45,979 3,183 Updated Sep 24, 2026

Unsupervised Learning of Cell Instances with Generative Routing Pyramids

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Textbook on reinforcement learning from human feedback

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Ontology describing the anatomy of Danio rerio from a single cell to adult fish. The namespace of the ontology is zebrafish_anatomical_ontology the prefix is ZFA. Updates to ZFA are released every …

Makefile 8 7 Updated Sep 23, 2026

A high-level programming language for generative biology

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A scheduler for GPU/CPU tasks

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Query every CUDA device attribute without profiling, and benchmark kernels against your hardware's theoretical peak.

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🧬 gget enables efficient querying of genomic reference databases

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inferring regulatory cellular dynamics

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Hue Bridge Emulator

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Fast, lossless LLM inference via dual-view diffusion decoding.

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Create web-based OME-Zarr galleries

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talkie is a vintage language model from 1930

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Browser-based exploration of vision embeddings in 3D space

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Fast Polar Decomposition for Muon

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A curated collection of skills for AI coding agents. Skills are packaged instructions and scripts that extend agent capabilities across development, documentation, planning, and professional workfl…

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Autoresearch for GPU kernels. Give it any PyTorch model, go to sleep, wake up to optimized Triton kernels.

Python 1,567 162 Updated Mar 19, 2026

AI agents running research on single-GPU nanochat training automatically

Python 96,718 13,524 Updated Mar 26, 2026

Official implementation of MuViT (CVPR 2026), a ViT-based architecture for multi-scale modelling of gigapixel microscopy images.

Python 48 7 Updated Jun 7, 2026

Ollama for classical ML models. AOT compiler that turns XGBoost, LightGBM, scikit-learn, CatBoost & ONNX models into native C99 inference code. One command to load, one command to serve. 336x faste…

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A minimal PyTorch re-implementation of AlphaFold2's model & training

Python 642 74 Updated May 9, 2026

⌥ Coding agent with the IDE wired in. Built by Stencil Labs.

TypeScript 33,161 3,523 Updated Sep 24, 2026
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Modern Bio-Formats wrapper with clean lazy Python API

Python 23 5 Updated Jun 25, 2026

List General Resources (e.g. GPUs) in Slurm

Rust 2 Updated Sep 22, 2026

The AI that really does things. Any OS. Any Platform. The lobster way. 🦞

TypeScript 390,394 82,137 Updated Sep 24, 2026

A comprehensive open source computer algebra system for computations in algebra, geometry, and number theory.

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[Elsevier JPDC 2025] Parallel watershed partitioning: GPU-based hierarchical image segmentation

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Gaussian Splatting Operators for SideFX Houdini

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