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FULL Augment Code, Claude Code, Cluely, CodeBuddy, Comet, Cursor, Devin AI, Junie, Kiro, Leap.new, Lovable, Manus, NotionAI, Orchids.app, Perplexity, Poke, Qoder, Replit, Same.dev, Trae, Traycer AI…

134,149 33,818 Updated Mar 28, 2026

A collection of MCP servers.

84,109 8,679 Updated Apr 3, 2026

🚀🤖 Crawl4AI: Open-source LLM Friendly Web Crawler & Scraper. Don't be shy, join here: https://discord.gg/jP8KfhDhyN

Python 63,248 6,462 Updated Mar 31, 2026

12 Lessons to Get Started Building AI Agents

Jupyter Notebook 55,780 19,292 Updated Mar 19, 2026

Context7 Platform -- Up-to-date code documentation for LLMs and AI code editors

TypeScript 51,469 2,437 Updated Apr 2, 2026

A light-weight and powerful meta-prompting, context engineering and spec-driven development system for Claude Code by TÂCHES.

JavaScript 47,095 3,836 Updated Apr 3, 2026

This repository contains the Hugging Face Agents Course.

MDX 27,500 1,973 Updated Apr 2, 2026

Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow

Python 25,540 11,683 Updated Jun 7, 2024

An open-source, code-first Python toolkit for building, evaluating, and deploying sophisticated AI agents with flexibility and control.

Python 18,715 3,170 Updated Apr 2, 2026

A MCP for Claude Desktop / Claude Code / Windsurf / Cursor to build n8n workflows for you

TypeScript 17,355 2,932 Updated Apr 2, 2026

A set of ready to use Agent Skills for research, science, engineering, analysis, finance and writing.

Python 17,169 1,890 Updated Apr 2, 2026

Posit Cheat Sheets - Can also be found at https://posit.co/resources/cheatsheets/.

TeX 6,328 1,942 Updated Mar 2, 2026

Biomni: a general-purpose biomedical AI agent

Python 2,924 534 Updated Mar 30, 2026

Rmd source files for the HarvardX series PH525x

R 2,138 1,955 Updated Feb 12, 2024

Listing of papers about machine learning for proteins.

1,696 218 Updated May 31, 2024

⚡ ♒ Rapid prokaryotic genome annotation

Perl 967 235 Updated Jan 6, 2026

A virtual lab of LLM agents for science research

Jupyter Notebook 655 170 Updated Dec 31, 2025

➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2

R 585 51 Updated Jan 13, 2026

A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.

Python 458 202 Updated Feb 13, 2026

fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scientific community willing to develop new scoring functions and…

C 457 85 Updated Mar 9, 2026

Fast Whole-Genome Similarity (ANI) Estimation

C++ 452 72 Updated Dec 16, 2025
Jupyter Notebook 443 82 Updated Jun 20, 2025

An R package for downstream data analysis of microbiome omics data

R 273 77 Updated Apr 1, 2026

NVIDIA Digital Biology examples for optimized inference and training at scale

214 59 Updated Feb 3, 2026

A collection of resources for learning about tools and programming languages related to Bioinformatics

194 26 Updated Jul 20, 2022

A Meta-barcoding pipeline for analysing ONT data in QIIME2 framework

Nextflow 127 22 Updated Jan 8, 2026

The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/

CSS 103 39 Updated Apr 5, 2022

A community-focused repository dedicated to fostering learning and development in Artificial Intelligence 🚀. This project, created by me, @Genetifics, aims to provide high-quality, accessible, and …

Jupyter Notebook 54 23 Updated Oct 6, 2024

Una lista de recursos para Bioinformática con contenido en español y en inglés.

53 7 Updated Dec 12, 2025

PyADM1: a Python implementation of Anaerobic Digestion Model number 1

Python 51 25 Updated Aug 9, 2022
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