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Jupyter Notebook 432 79 Updated Jun 20, 2025

Una lista de recursos para Bioinformática con contenido en español y en inglés.

51 7 Updated Dec 12, 2025

A set of ready to use scientific skills for Claude

Python 2,228 264 Updated Dec 18, 2025

Fast Whole-Genome Similarity (ANI) Estimation

C++ 445 70 Updated Dec 16, 2025

Context7 MCP Server -- Up-to-date code documentation for LLMs and AI code editors

TypeScript 39,731 1,970 Updated Dec 19, 2025

A MCP for Claude Desktop / Claude Code / Windsurf / Cursor to build n8n workflows for you

TypeScript 10,922 2,018 Updated Dec 21, 2025

A comprehensive Model Context Protocol (MCP) server providing advanced access to the UniProt protein database.

JavaScript 16 8 Updated Dec 21, 2025

An R package for data analysis in microbial community ecology

R 257 75 Updated Dec 20, 2025

🍄 Qiime2 ITS classifiers for the UNITE database

HTML 47 9 Updated Aug 4, 2025

Biomni: a general-purpose biomedical AI agent

Python 2,397 403 Updated Dec 15, 2025

A collection of MCP servers.

77,133 6,564 Updated Dec 21, 2025

➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2

R 567 50 Updated Dec 16, 2025

An open-source, code-first Python toolkit for building, evaluating, and deploying sophisticated AI agents with flexibility and control.

Python 16,602 2,646 Updated Dec 19, 2025

FULL Augment Code, Claude Code, Cluely, CodeBuddy, Comet, Cursor, Devin AI, Junie, Kiro, Leap.new, Lovable, Manus, NotionAI, Orchids.app, Perplexity, Poke, Qoder, Replit, Same.dev, Trae, Traycer AI…

101,323 27,027 Updated Dec 19, 2025

NVIDIA Digital Biology examples for optimized inference and training at scale

191 54 Updated Dec 1, 2025

12 Lessons to Get Started Building AI Agents

Jupyter Notebook 47,337 16,265 Updated Dec 21, 2025

This repository contains the Hugging Face Agents Course.

MDX 24,317 1,716 Updated Nov 17, 2025

A virtual lab of LLM agents for science research

Jupyter Notebook 573 155 Updated Aug 2, 2025

A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.

Python 454 204 Updated Dec 20, 2024

⚡ ♒ Rapid prokaryotic genome annotation

Perl 943 233 Updated Dec 15, 2025

PyADM1: a Python implementation of Anaerobic Digestion Model number 1

Python 49 24 Updated Aug 9, 2022

fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scientific community willing to develop new scoring functions and…

C 425 78 Updated Sep 9, 2024

Listing of papers about machine learning for proteins.

1,682 219 Updated May 31, 2024

Bash pipeline for analysis of ONT full-length 16S sequences in QIIME2

Shell 29 15 Updated Feb 3, 2020

A Meta-barcoding pipeline for analysing ONT data in QIIME2 framework

Nextflow 114 20 Updated Mar 26, 2025

Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow

Python 25,467 11,719 Updated Jun 7, 2024

A community-focused repository dedicated to fostering learning and development in Artificial Intelligence 🚀. This project, created by me, @Genetifics, aims to provide high-quality, accessible, and …

Jupyter Notebook 56 24 Updated Oct 6, 2024

The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/

CSS 101 39 Updated Apr 5, 2022

A collection of resources for learning about tools and programming languages related to Bioinformatics

188 26 Updated Jul 20, 2022

Posit Cheat Sheets - Can also be found at https://posit.co/resources/cheatsheets/.

TeX 6,263 1,931 Updated Sep 24, 2025
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