- Heidelberg, Germany
- https://www.lukaskremer.com/
- https://orcid.org/0000-0003-3170-6295
- @LPMKremer
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ggpointdensity Public
📈 📊 Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.
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scbs Public
Python package with CLI for the analysis of single cell methylation data. Now known as MethSCAn: https://github.com/anders-biostat/MethSCAn
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scanpy Public
Forked from scverse/scanpySingle-cell analysis in Python. Scales to >1M cells.
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 16, 2023 -
awesome-single-cell Public
Forked from seandavi/awesome-single-cellCommunity-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
MIT License UpdatedOct 28, 2022 -
AAV-screening Public
Code used in the screening for efficient AAV serotypes
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tecan Public
Read Absorbance Files of the Tecan Plate Reader Infinite 200
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gallery Public
Forked from ggplot2-exts/galleryGallery of ggplot2 extensions
CSS UpdatedDec 22, 2019 -
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epipolymorphism Public
A command-line tool to estimate epigenetic polymorphism from bisulfite-converted sequencing reads
Python MIT License UpdatedSep 25, 2019 -
CAFE_fig Public
A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)
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epiScanpy Public
Forked from colomemaria/epiScanpyEpiscanpy: Epigenomics Single Cell Analysis in Python
Python BSD 3-Clause "New" or "Revised" License UpdatedMay 27, 2019 -
showTree Public
showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.
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plate_scATAC-seq Public
Forked from dbrg77/plate_scATAC-seqA rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method
Jupyter Notebook UpdatedMar 22, 2019 -
scanpy_usage Public
Forked from scverse/scanpy_usageScanpy use cases.
HTML BSD 3-Clause "New" or "Revised" License UpdatedMar 19, 2019 -
MSA_trimmer Public
Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.
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Data Public
Forked from Martin-Villalba-lab/DataData shared by Martin-Villalba-lab at DKFZ, Heidelberg, Germany
HTML UpdatedFeb 28, 2019 -
proDD Public
Forked from const-ae/proDDDifferential Detection for Label-free (LFQ) Mass Spec Data
R UpdatedDec 10, 2018 -
dmrseq Public
Forked from kdkorthauer/dmrseqR package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
R MIT License UpdatedNov 2, 2018 -
InsulinReceptorEvo Public
"Reconstructed Evolution of Insulin Receptors in Insects Reveals Duplications in Early Insects and Cockroaches" - supplementary data and figures
UpdatedMay 27, 2018 -
hydeout Public
Forked from fongandrew/hydeoutA refreshed version of Hyde for Jekyll 3.x
CSS Other UpdatedApr 10, 2018 -
Genomic-comparisons-in-Blattodea Public
Forked from ebbgroup/Genomic-comparisons-in-BlattodeaGenome analysis scripts
Python UpdatedDec 9, 2017 -
CatanDice Public
Kivy smartphone app to simulate less erratic dice rolls for the Settlers of Catan card game.
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TEcov Public
A pipeline to to determine the repeat content of genes and their neighboring regions.
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ursgal Public
Forked from ursgal/ursgalUrsgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis
Python MIT License UpdatedMar 17, 2017 -
RaspberryPiAlarmClock Public
A basic radio alarm clock tool that first plays a web radio and then a buzzer. Alarm times are retrieved from Google Calendar.
Python UpdatedJan 17, 2017 -
biopython.github.io Public
Forked from biopython/biopython.github.ioSource of biopython.org website, migrated from MediaWiki
CSS UpdatedNov 16, 2016