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@PyAutoLabs

PyAutoLabs

Open-source scientific software for automated astronomical data analysis

PyAutoLabs

Open-source software for Bayesian inference, galaxy morphology and strong gravitational lensing.

PyAutoLabs develops scientific libraries, example workspaces and tutorial courses for model fitting and astronomy, from general-purpose probabilistic programming to galaxy structure and strong-lens modeling.

Community

Questions, help with your code or your analysis, and ideas: the PyAutoLabs Discussions. Bug reports with a reproducer (a snippet, the traceback, your versions): an issue on the library's tracker. The Slack is for collaborators, by invitation.

The software is organised as three families, each a library plus the repositories a working scientist needs around it.

PyAutoFit

Probabilistic programming: model composition, non-linear search and Bayesian inference (pip install autofit).

Repo Role
PyAutoFit The instrument — the model-fitting and statistical inference library itself.
autofit_workspace Where the scientist works — example scripts, pipelines and configuration.
HowToFit The classroom — narrative lectures teaching model fitting from first principles.
autofit_assistant The AI research assistant — point Claude or ChatGPT at it and ask.
autofit_workspace_test The referee — regression checks that every result still reproduces.

PyAutoLens

Strong gravitational lens modeling, from Hubble to Euclid and JWST (pip install autolens).

Repo Role
PyAutoLens The instrument — the strong-lens modeling library itself.
autolens_workspace Where the lensing scientist works — example scripts, pipelines and datasets.
HowToLens The classroom — narrative lectures teaching lens modeling from first principles.
autolens_assistant The AI research assistant — point Claude or ChatGPT at it and ask.
autolens_workspace_test The referee — regression checks that every result still reproduces.
autolens_workspace_developer The back-room workbench — developer scripts and experiments.
autolens_profiling The stopwatch — JAX likelihood performance runs and results.
autolens_inference The proving ground — which searches find the right lens model fastest, on CPU and A100.

PyAutoGalaxy

Multi-wavelength modeling of galaxy light, mass and morphology (pip install autogalaxy).

Repo Role
PyAutoGalaxy The instrument — the galaxy structure and morphology library itself.
autogalaxy_workspace Where the galaxy scientist works — example scripts, pipelines and datasets.
HowToGalaxy The classroom — narrative lectures teaching galaxy modeling from first principles.
autogalaxy_workspace_test The referee — regression checks that every result still reproduces.
autogalaxy_assistant The AI research assistant — point Claude or ChatGPT at it and ask.

Under the hood sit PyAutoArray (data structures, grids and inversions) and PyAutoReduce (reducing archival telescope imaging into modeling-ready datasets).

Getting started

pip install autolens
git clone https://github.com/PyAutoLabs/autolens_workspace
cd autolens_workspace
python welcome.py

Documentation for every project is collected at pyautolabs.github.io.

Citation

If you use PyAutoLabs software in your research, please cite:

Nightingale, J. W. et al. (2021). PyAutoLens: Open-Source Strong Gravitational Lensing. JOSS, 6(58), 2825.

Nightingale, J. W. et al. (2021). PyAutoFit: A Classy Probabilistic Programming Language for Model Composition and Fitting. JOSS, 6(58), 2550.

Nightingale, J. W. et al. (2023). PyAutoGalaxy: Open-Source Multiwavelength Galaxy Structure & Morphology. JOSS, 8(81), 4475.

License

All PyAutoLabs packages are released under the MIT License.

PyAutoScientist

PyAutoScientist is Jammy2211's experimental, vibe-coded AI software development ecosystem. Visitors are welcome to explore the documentation and the repositories below, but contributors are not currently expected to use it. Jammy2211 hopes to make it software that others can easily use one day.

Organ Repo Role
Brain PyAutoBrain Works out how: classifies, plans and routes work through specialist reasoning and coding agents.
Mind PyAutoMind Captures intent: every piece of work begins as a plain-English description of what should change and is tracked from the initial idea to its completed implementation.
Cortex PyAutoCortex Holds the science body map and one ledger per science project — the runs on the cluster and a dated log of what was set off, seen and learned — so a project is picked up where it was left, apart from software development.
Memory PyAutoMemory Provides long-term scientific knowledge through cross-linked literature wikis, concepts and verifiable citations.
Heart PyAutoHeart Monitors repository health and supplies the authoritative GREEN/YELLOW/RED release-readiness verdict.
Hands PyAutoHands Executes builds and releases: packages libraries, generates notebooks, creates tags and publishes releases to PyPI.
Nerves PyAutoNerves Provides the configuration and serialization layer connecting shared conventions across the scientific libraries and workspaces.
Gut PyAutoGut Holds stale branches, dead code and other condemned material as recoverable Git references before it is permanently removed.

Popular repositories Loading

  1. PyAutoLens PyAutoLens Public

    PyAutoLens: Open-Source Strong Gravitational Lensing

    Python 187 38

  2. PyAutoFit PyAutoFit Public

    PyAutoFit: Classy Probabilistic Programming

    Python 65 15

  3. PyAutoGalaxy PyAutoGalaxy Public

    PyAutoGalaxy: Open-Source Multiwavelength Galaxy Structure & Morphology

    Python 33 16

  4. autolens_workspace autolens_workspace Public

    PyAutoLens examples, tutorials, and datasets

    Jupyter Notebook 28 17

  5. PyAutoArray PyAutoArray Public

    Array and grid manipulation for the PyAuto ecosystem

    Python 10 8

  6. autofit_workspace autofit_workspace Public

    PyAutoFit examples, tutorials, and HowToFit lectures

    Jupyter Notebook 8 3

Repositories

Showing 10 of 45 repositories

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