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ventolab / CellphoneDB

CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.

Jupyter Notebook 470 63 Updated Jun 6, 2025

mousepixels / sanbomics_scripts

scripts and notebooks from sanbomics

Jupyter Notebook 467 168 Updated Nov 25, 2024

jaleesr / SenePy

SenePy is a set of tools to score single-cells based on their expression of cell-specific senescence markers. Please see the following publication By Sanborn MA et al in Nature Communications (2025…

Jupyter Notebook 53 8 Updated Jan 30, 2025

ventolab / Human-Endometrial-Cell-Atlas_HECA

Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.

Jupyter Notebook 31 4 Updated Jun 19, 2024

hdsingh / Fetal-Distress-Classification

Project to save innocent infant lives using Cardiotocography and CNN image classification

Jupyter Notebook 21 9 Updated May 22, 2019

getzlab / CPTAC_PanCan_PTM_2023

Jupyter Notebook 17 2 Updated Oct 3, 2023

alkoenig / Atlas_of_Human_Heart_Failure_Lavine

Scripts used to generate the data/figures contained in "Single Cell Transcriptomics Reveals Cell Type Specific Diversification in Human Heart Failure"

Jupyter Notebook 13 4 Updated Mar 10, 2023

ramadatta / Youtube

Jupyter Notebook 2 Updated Dec 18, 2023