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SomaticMutations
SomaticMutations PublicThis a snakemake pipeline to detect Somatic mutations (GATK4 and Mutect2)
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gatkVariantCalling
gatkVariantCalling PublicSnakemake pipeline for variant calling using GATK
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StructureVariations
StructureVariations PublicSnakemake pipeline for detecting, annotating, filtering and visualising structure variations and gene fusions from WGS/WES.
Python 3
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mouse_Multiomics
mouse_Multiomics PublicscRNA and scATAC seq analysis for mouse brain data using Arhcr
R
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