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@Singh-Lab

Singh Lab

Prof. Mona Singh's lab at Princeton University

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  1. PertInInt PertInInt Public

    Rapidly uncover significantly somatically mutated protein functional regions

    Python 7 1

  2. uKIN uKIN Public

    Using Knowledge In Networks

    Ruby 3

  3. InteracDome InteracDome Public

    Compute Site-Based Ligand-Binding Frequencies across the InteracDome

    Python 7 5

  4. DeMaSk DeMaSk Public

    Prediction of protein substitution impact using a directional substitution matrix and homolog alignments

    Python 12 2

  5. dSPRINT dSPRINT Public

    Per-position prediction of protein domains interaction-sites

    Python 6 2

  6. TandemDuplications TandemDuplications Public

    Python 2

Repositories

Showing 10 of 22 repositories
  • Singh-Lab/evaluating_generative_sequence_models's past year of commit activity
    Python 0 0 0 0 Updated Sep 16, 2026
  • Singh-Lab/plm_strengths_and_limitations's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 4, 2026
  • FBApro Public

    A linear-transformation based framework for integrating data with constraint based metabolic models

    Singh-Lab/FBApro's past year of commit activity
    Jupyter Notebook 2 MIT 0 0 0 Updated Aug 11, 2026
  • ARIES Public

    Fast, accurate construction of multiple sequence alignments from protein language embeddings

    Singh-Lab/ARIES's past year of commit activity
    Python 20 MIT 4 0 0 Updated Jul 22, 2026
  • Dyscovr Public
    Singh-Lab/Dyscovr's past year of commit activity
    R 0 MIT 0 0 0 Updated Jul 12, 2026
  • PathwayCCA Public

    PathwayCCA is a framework for pathway-level association analysis between multi-omic driver alterations and gene-set expression programs. The repository provides a complete implementation of Regularized CCA (RCCA), Constrained CCA (CCCA), and the proposed PathwayCCA framework with resampling-based hypothesis test.

    Singh-Lab/PathwayCCA's past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jul 7, 2026
  • kinaid Public

    KINAID Dashboard and library code

    Singh-Lab/kinaid's past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 23, 2025
  • bom-pooling Public

    Implementation of ISMB-25 Paper: Locality-aware pooling enhances protein language model performance across varied applications

    Singh-Lab/bom-pooling's past year of commit activity
    Python 9 0 0 0 Updated Aug 17, 2025
  • optosos_supp_figures Public

    Code to generate supplementary figures for optos paper

    Singh-Lab/optosos_supp_figures's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jul 26, 2024
  • Singh-Lab/The-evolutionary-landscape-of-primate-protein-ligand-interfaces's past year of commit activity
    Python 1 0 0 0 Updated Aug 26, 2022

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