Stars
Perforator is a cluster-wide continuous profiling tool designed for large data centers
🚀 Efficient implementations for emerging model architectures
Give your agents the power of the Hugging Face ecosystem
A lightweight, lightning-fast, in-process vector database
SciRS2 - Scientific Computing and AI in Rust., providing SciPy-compatible APIs while leveraging Rust's performance, safety, and concurrency features. Unlike traditional scientific libraries
MMseqs2: ultra fast and sensitive search and clustering suite
A high-performance, ALL-in-ONE suite for quantitative genetics that unifies genome-wide association studies (GWAS) and genomic selection (GS).
A versatile pairwise aligner for genomic and spliced nucleotide sequences
《Hello 算法》：动画图解、一键运行的数据结构与算法教程。支持简中、繁中、English、日本語，提供 Python, Java, C++, C, C#, JS, Go, Swift, Rust, Ruby, Kotlin, TS, Dart 等代码实现
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
C library for high-throughput sequencing data formats
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Sarasa Gothic / 更纱黑体 / 更紗黑體 / 更紗ゴシック / 사라사 고딕
The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.
A C++ drop-in replacement of FastQC to assess the quality of sequence read data
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
Scripts to download genomes from the NCBI FTP servers
PlantCAD: cross-species modeling of plant genomes
Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
PaCMAP in pure MLX for Apple Silicon. Pure GPU, no scipy/numba.
Explore a comprehensive collection of basic theories, applications, papers, and best practices about Large Language Models (LLMs) in genomes.