Stars
A lightweight, lightning-fast, in-process vector database
SciRS2 - Scientific Computing and AI in Rust., providing SciPy-compatible APIs while leveraging Rust's performance, safety, and concurrency features. Unlike traditional scientific libraries
PaCMAP in pure MLX for Apple Silicon. Pure GPU, no scipy/numba.
Give your agents the power of the Hugging Face ecosystem
A high-performance, ALL-in-ONE suite for quantitative genetics that unifies genome-wide association studies (GWAS) and genomic selection (GS).
🚀 Efficient implementations for emerging model architectures
A Rust-Based suite of utilities for ultra-fast genomic feature extraction
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.
Explore a comprehensive collection of basic theories, applications, papers, and best practices about Large Language Models (LLMs) in genomes.
ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model
crussmap is a faster tool to convert genome coordinates between difference reference assemblies.
Perforator is a cluster-wide continuous profiling tool designed for large data centers
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene reg…
《Hello 算法》：动画图解、一键运行的数据结构与算法教程。支持简中、繁中、English、日本語，提供 Python, Java, C++, C, C#, JS, Go, Swift, Rust, Ruby, Kotlin, TS, Dart 等代码实现
PlantCAD: cross-species modeling of plant genomes
A self-paced course to learn Rust, one exercise at a time.
Cython helper library for pyranges. Find nearest interval in linear time at C speed.
PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)
A Bayesian grouped mixture of regressions model capable of estimating SNP marker effect sizes for multiple outcomes simultaneously
A C++ drop-in replacement of FastQC to assess the quality of sequence read data
MMseqs2: ultra fast and sensitive search and clustering suite