Structural variant toolkit for VCFs

Jasmine: SV Merging Across Samples

Toolset for SV simulation, comparison and filtering

VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format

Type-Safe Bioinformatics in TypeScript

CLI interfaces & config objects, from types

3Di substitution models for BEAST 2

For all your cluster needs

A terminal UI for monitoring Snakemake workflows

SeRPentine - the Snakemake research platform

An open, technical and introductory book for the Zig programming language 📚📖

A prototype of GeoParquet to PMTiles in Rust

BA.2.86 project with Sigal lab

A Phylogenetics toolkit for Javascript

Viral (meta)-genome assembly pipeline.

Wirehair : O(N) Fountain Code for Large Data

A phylogenetically-aware framework for detecting evolutionary associations between binary traits

Connecting research programs and the outside world

ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes

Space-filling curve for rectangular domains or arbitrary size.

WebAssembly (Wasm) arch support for the Linux kernel

A free-range, non-GMO fork of busybox in 100% Rust 🦀

Voici turns any Jupyter Notebook into a static web application

Material assoicated with teaching the subject COMP90016

FastTree 2: Approximately-Maximum-Likelihood Trees for Large Alignments

A Jupyter drive for sharing files and collaborating in real time.

📟 Build ergonomic, high-performance command-line tools (CLI) with zig.

R implementation of Niche Mapper software for biophysical modelling