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Add module category for other data visualisation #2205

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Merged
robinschmid merged 1 commit into from
Nov 8, 2024
Merged

Add module category for other data visualisation #2205

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3 changes: 2 additions & 1 deletion mzmine-community/src/main/java/io/github/mzmine/modules/MZmineModuleCategory.java
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Original file line number Diff line number Diff line change
Expand Up @@ -60,6 +60,7 @@ public enum MZmineModuleCategory {
VISUALIZATIONRAWDATA("Visualization"), //
VISUALIZATIONFEATURELIST("Visualization feature list"), //
VISUALIZATION_RAW_AND_FEATURE("Visualization data"), //
VISUALIZATION_OTHER_DATA("Visualization of data from other detectors"), //
DATAANALYSIS("Data analysis"), //
HELPSYSTEM("Help"), //
TOOLS("Tools"), OTHER_DATA_PROCESSING("Processing other data"); //
Expand Down Expand Up @@ -90,7 +91,7 @@ public MainCategory getMainCategory() {
// no main category
case HELPSYSTEM, TOOLS -> MainCategory.OTHER;
// no default so that the compiler marks missing cases
case OTHER_DATA_PROCESSING -> MainCategory.OTHER_DATA;
case OTHER_DATA_PROCESSING, VISUALIZATION_OTHER_DATA -> MainCategory.OTHER_DATA;
};
}

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19 changes: 10 additions & 9 deletions ...b/mzmine/modules/dataprocessing/featdet_baselinecorrection/BaselineCorrectionPreview.java
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Expand Up @@ -103,19 +103,20 @@ public void updateChart(@NotNull List<DatasetAndRenderer> datasets,
final List<DatasetAndRenderer> data = new ArrayList<>();

data.addAll(List.of(new DatasetAndRenderer(new ColoredXYDataset(
new IonTimeSeriesToXYProvider(corrected, feature.toString() + " corrected",
feature.getRawDataFile().getColor()), RunOption.THIS_THREAD),
new ColoredAreaShapeRenderer()),
new DatasetAndRenderer(new ColoredXYDataset(
new IonTimeSeriesToXYProvider(full, feature.toString(),
feature.getRawDataFile().getColor()), RunOption.THIS_THREAD),
new ColoredXYLineRenderer())));
new IonTimeSeriesToXYProvider(corrected, feature.toString() + " corrected",
feature.getRawDataFile().getColor()), RunOption.THIS_THREAD),
new ColoredAreaShapeRenderer()), new DatasetAndRenderer(new ColoredXYDataset(
new IonTimeSeriesToXYProvider(full, feature.toString(),
feature.getRawDataFile().getColor()), RunOption.THIS_THREAD),
new ColoredXYLineRenderer())));

additionalPreviewData.forEach(a -> {
if ("samples".equals(a.getSeriesKey())) {
data.add(new DatasetAndRenderer(new ColoredXYDataset(a), new ColoredXYShapeRenderer()));
data.add(new DatasetAndRenderer(new ColoredXYDataset(a, RunOption.THIS_THREAD),
new ColoredXYShapeRenderer()));
} else {
data.add(new DatasetAndRenderer(new ColoredXYDataset(a), new ColoredXYLineRenderer()));
data.add(new DatasetAndRenderer(new ColoredXYDataset(a, RunOption.THIS_THREAD),
new ColoredXYLineRenderer()));
}
});

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