Stars
A Python implementation of global optimization with gaussian processes.
A small wrapper package that enables full survival curve estimation using xgboost
Interpret machine learning predictions using agnostic local feature importance based on Shapley Values.
Visualization and analysis software for Hi-C data -
Physics-Informed Neural networks for Advanced modeling
Code, prompt and output hiding for Jupyter/IPython notebooks.
A Python-based toolbox of various methods in decision making, uncertainty quantification and statistical emulation: multi-fidelity, experimental design, Bayesian optimisation, Bayesian quadrature, …
An implementation of Nagel-Schreckenberg vehicular traffic automaton
Modelling Mpox transmission in the United Kingdom.
Supplement for Mathematica for Bioinformatics
How to use leaflet to make an interactive map using child obesity at reception year data in England.
How to use leaflet to make an interactive map using child obesity at reception year data in England.
HDR UK Summer School demo for Image Registration
A realtime heart-beat monitoring implementation for the raspberry pi using python and FreePascal. Tested using the Polar H7 heart-beat sensor.
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Fit interpretable models. Explain blackbox machine learning.
Derive social mixing matrices from survey data.
Pre-built implicit layer architectures with O(1) backprop, GPUs, and stiff+non-stiff DE solvers, demonstrating scientific machine learning (SciML) and physics-informed machine learning methods
Parallel Computing and Scientific Machine Learning (SciML): Methods and Applications (MIT 18.337J/6.338J)
Tutorials for doing scientific machine learning (SciML) and high-performance differential equation solving with open source software.
Kalman Filter book using Jupyter Notebook. Focuses on building intuition and experience, not formal proofs. Includes Kalman filters,extended Kalman filters, unscented Kalman filters, particle filte…
Software for complex network analysis -- see www.complex-networks.net
A fast key/value search and store code for strings implemented by using a multiway trie. For each key the frequency distribution histogram is calculated and represented.