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Open source AI/ML capabilities for the FiftyOne ecosystem
Display tabular data in a visually appealing ASCII table format
[Nature Communications] O2VAE: a model for orientation-invariant representation learning (phenotyping) in cell biology data
A collection of resources on applications of multi-modal learning in medical imaging.
Code for visualizing the loss landscape of neural nets
Examples and guides for using the OpenAI API
Persists tmux environment across system restarts.
The official PyTorch implementation of the paper "SAITS: Self-Attention-based Imputation for Time Series". A fast and state-of-the-art (SOTA) deep-learning neural network model for efficient time-s…
A Collection of Variational Autoencoders (VAE) in PyTorch.
AMAP-APP is a desktop application that leverages deep learning to performs segmentation and morphometry quantification of fluorescent microscopy images of podocytes.
Repository of the paper "Language models are good pathologists: using attention-based sequence reduction and text-pretrained transformers for efficient WSI classification"
Prediction of HER2 overexpression status and IHC score as seen in "Predicting the HER2 status in esophageal cancer from tissue microarrays using convolutional neural networks".
Source code for "Unsupervised Object Representation Learning using Translation and Rotation Group Equivariant VAE," in pytorch. NeurIPS 2022
Repository for WormSwin: Instance segmentation of C. elegans using vision transformer as appeared in Nature Scientific Reports 2023.
Source code for "Explicitly disentangling image content from translation and rotation with spatial-VAE" - NeurIPS 2019
Visualize, query, and stream to train on multimodal robotics data.
[Comms Bio 2023] Official Code for Fast Detection of Slender Bodies in High Density Microoscopy Data
The official repo for [NeurIPS'22] "ViTPose: Simple Vision Transformer Baselines for Human Pose Estimation" and [TPAMI'23] "ViTPose++: Vision Transformer for Generic Body Pose Estimation"
Code release for "Cut and Learn for Unsupervised Object Detection and Instance Segmentation" and "VideoCutLER: Surprisingly Simple Unsupervised Video Instance Segmentation"
😎 Awesome lists about all kinds of interesting topics [NOTE: Pull requests are temporarily disabled until I have a chance to catch up with the existing ones]
A curated list of awesome Machine Learning frameworks, libraries and software.
Compilation of information and code bases related to open-source trackers for C. elegans
♾️ CML - Continuous Machine Learning | CI/CD for ML
PyTorch Lightning + Hydra. A very user-friendly template for ML experimentation. ⚡🔥⚡
Make drawing and labeling bounding boxes a piece of cake