User-facing, web-based documentation about the NMDC

Prototype automation

NMDC data processing system for metabolomics, lipidomics, and NOM data. Workflow and metadata manager.

National Microbiome Data Collaborative (NMDC) unified data model

A repository to that holds the code for the NMDC Submission portal metadata suggestor tool, powered by AI

MongoDB + Parquet analytics for NCBI BioSample/BioProject/SRA and NMDC submission-portal metadata. Environmental triad annotation, harmonized-attribute counts, measurement discovery, value-set voting sheets.

Runtime system for NMDC data management and orchestration

Data portal client and server for NMDC.

Mass spectrometry metadata generation

CLI tool to convert metadata submissions from the NMDC submission portal to DOE user facility Excel templates