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1. alcohol-yield-prediction alcohol-yield-prediction Public

   Machine learning prediction of alcohol content in wine fermentation from physicochemical properties (UCI dataset). Random Forest, R² = 0.93.

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2. crispr-guide-designer crispr-guide-designer Public

   A bioinformatics tool that designs and ranks CRISPR-Cas9 guide RNAs for any target gene, using published design rules and off-target checking. Built with Python and Biopython.

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3. glimpse-gpu-imputation glimpse-gpu-imputation Public

   GPU (PyTorch) implementation of the Li-Stephens imputation HMM, benchmarked against CPU and validated against GLIMPSE2 on real 1000 Genomes chr22 data.

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4. endometriosis-transcriptomics endometriosis-transcriptomics Public

   End-to-end transcriptomics pipeline for endometriosis: merges 3 real GEO datasets, removes batch effects (ComBat), runs differential expression (limma), classifies patients vs controls with ML, and…

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5. migraine-drug-target-pipeline migraine-drug-target-pipeline Public

   A network-to-structure drug-target discovery pipeline for migraine: builds a PPI network from GWAS genes, finds the disease module, ranks hub proteins, retrieves 3D structures, and detects druggabl…

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6. pcos-metabolomics pcos-metabolomics Public

   Real-data metabolomics pipeline for PCOS: auto-downloads MetaboLights plasma data (MTBLS12968), finds differential metabolites, runs KEGG pathway enrichment, renders annotated metabolic maps (pathv…

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