A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods

Fast Gene Set Enrichment Analysis

R package for modeling single cell UMI expression data using regularized negative binomial regression

Clone of the Bioconductor repository for the SingleR package.

A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions

Evaluation of Cell Type Annotation R Packages on Single Cell RNA-seq Data

a parallel R package for detecting copy-number alterations from short sequencing reads

Git mirror of Bioconductor SRAdb package

Cluster Identity Predictor (R package implementation)

zero-inflated negative binomial gene expression in R

Optimization process of WGCNA hierarchical clustering with k-means

Comprehensive Detection and Analysis of Chimeras

Reconciled rat and human metabolic networks for comparative toxicogenomics analyses and biomarker predictions

Aligner Comparison

Functions to train AIMS' like models