dev -> main for 4.0.2 (#4255)

Co-authored-by: Nicolas Vannieuwkerke <101190534+nvnieuwk@users.noreply.github.com>

Merge pull request #4247 from nf-core/dev

Merge pull request #4225 from nf-core/dev

Merge pull request #4015 from nf-core/dev

Merge pull request #3919 from nf-core/dev

Merge pull request #3872 from nf-core/dev

Merge pull request #3838 from nf-core/dev

Merge pull request #3833 from nf-core/dev

dev > main for 3.4.0 release

fix version number

Merge pull request #3602 from nf-core/dev