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National Institute of Allergy and Infectious Diseases (NIAID)

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  1. dsb dsb Public

    Normalize CITEseq Data

    R 71 12

  2. imaris_extensions imaris_extensions Public

    Algorithmic and Utility Extensions for the Imaris Program

    Python 21 3

  3. sitk-ibex sitk-ibex Public

    Aligning images acquired with the IBEX microscopy imaging technique

    Python 20 6

  4. terraform-aws-managed-config-rules terraform-aws-managed-config-rules Public

    AWS Config Managed Rules Terraform Module

    HCL 19 10

  5. virome-pipeline virome-pipeline Public

    This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.

    Python 18 1

  6. covid19-time-resolved covid19-time-resolved Public

    This repository consists of scripts and workflows used for generating results, figures, and tables published in the article: Can Liu, Andrew J. Martins, William W. Lau, Nicholas Rachmaninoff, ..., …

    R 15 9

Repositories

Showing 10 of 176 repositories
  • tomojs-pytools Public
    niaid/tomojs-pytools's past year of commit activity
    Python 3 2 3 4 Updated Sep 23, 2026
  • openapi-generator Public Forked from OpenAPITools/openapi-generator

    OpenAPI Generator allows generation of API client libraries (SDK generation), server stubs, documentation and configuration automatically given an OpenAPI Spec (v2, v3)

    niaid/openapi-generator's past year of commit activity
    Java 0 Apache-2.0 7,810 0 197 Updated Sep 23, 2026
  • terraform-aws-notify-slack Public Forked from terraform-aws-modules/terraform-aws-notify-slack

    Terraform module which creates SNS topic and Lambda function which sends notifications to Slack

    niaid/terraform-aws-notify-slack's past year of commit activity
    Python 0 Apache-2.0 349 0 1 Updated Sep 22, 2026
  • image_portal_workflows Public

    Workflows related to project previously referred to as "Hedwig"

    niaid/image_portal_workflows's past year of commit activity
    Python 5 BSD-3-Clause 1 33 7 Updated Sep 22, 2026
  • rap_sitkCore Public

    Common imaging utilities for RAP

    niaid/rap_sitkCore's past year of commit activity
    Python 0 Apache-2.0 1 1 5 Updated Sep 18, 2026
  • monarch-actions-switch-account Public

    GitHub Action used to switch between Monarch Spaces accounts

    niaid/monarch-actions-switch-account's past year of commit activity
    TypeScript 1 MIT 0 1 16 Updated Sep 13, 2026
  • monarch-actions-key-writer Public Forked from shimataro/ssh-key-action

    Monarch GitHub Action that installs SSH key to .ssh

    niaid/monarch-actions-key-writer's past year of commit activity
    TypeScript 0 MIT 105 0 21 Updated Sep 9, 2026
  • tb_lesion_cxr_segmentation Public
    niaid/tb_lesion_cxr_segmentation's past year of commit activity
    Python 1 Apache-2.0 1 0 0 Updated Sep 8, 2026
  • imaris_extensions Public

    Algorithmic and Utility Extensions for the Imaris Program

    niaid/imaris_extensions's past year of commit activity
    Python 21 Apache-2.0 3 2 0 Updated Aug 28, 2026
  • MHo_BCBB_STx_workshop Public

    Teaching Materials for 2024-2025 Spatial Transcriptomics workshops, prepared by Margaret Ho (NIAID BCBB Science Support)

    niaid/MHo_BCBB_STx_workshop's past year of commit activity
    HTML 2 0 1 0 Updated Aug 21, 2026
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