Lists (28)
Advancing Julia
Repos that advance Julia as a compelling scientific programming language.AI-Assisted Engineering
Programming will never be the same.Bioinformatics
"Bioinformatics is terrible. Everybody knows bioinformatics is terrible...it’s not a good situation that we’re in."Biology in the Frontend
Interactive simulations, visualizations, and demos served in the browser.Command-line Utilities
Future-facing command-line tools written in innovative languages or that raise the bar in some other way.Data Visualization
Know your data by seeing it.Design as Code
Functional Programming
Writing composable, refactorable, and robust code with an FP paradigmGenomic epidemiology🦠🧬
Get started in Bioinformatics
Looking for inspiration to get started with making sense of noisy biological data? These repos punch above their weight.GIS
Spatial statistics, cartography, and other spatially explicit methodsGleam is cool
Glimpses of Jai
Early looks at the Jai programming language, which remains in closed betaGo in Bioinformatics
Tools built in Go that can be interfaced with in the command line, or in Go source code.i use neovim, btw
we don't talk about vscode in this householdLearning Me a Haskell
Finally giving in and learning Haskell—I may never be the sameMetagenomics is hard :(
but fun?Python as a Glue Language
Python is beautiful...but slow. These tools help bring out its best side: as an elegant glue language connecting faster pieces of software.R in Science
"The best thing about R is it was designed by statisticians. The worst thing about R is it was designed by statisticians."Rust does all the things
Tools built in Rust that can be interfaced with in the command line, or in Rust source code.Scientific Reproducibility
Tools that make doing reproducible science—a very difficult task!—easier.Simulation & Testing
Software for Biodiversity
Software developed to help understand and solve the biodiversity crisis and advance our understanding of ecology and evolution in general.Standards for Excellent Programs
TUIs
I love TUIs and I don't care who knows itTurns out your app is a database
Repos that are explicitly--or accidentally--database projects.TypeScript Eats the World
We all give into TypeScript eventually...Workflow Orchestration
Tools for deploying many steps of dataflow across a variety of infrastructuresStars
This project template should help get you started developing a multi-platform desktop application with tray menu support using Tauri, SolidJS, TanStack Router, Typescript, Tailwind CSS, and Vite.
A template for developing DuckDB extensions in Zig
A clean desktop application template that combines Tauri 2 with Svelte 5 + Shadcn-svelte, including automated CI/CD pipelines for Windows, Linux, and Mac builds.
A minimal astro theme for quickly creating your own blog
Blog theme for Astro with search and comments built-in. Zero frameworks.
A Python3 project template with several useful, standard, integrated batteries to help you write clean, tested, quality code, following the Zen of Python.
A template for standard compliant snakemake-workflows