OHSU CEDAR
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qupath_monaillabel_plugin
qupath_monaillabel_plugin PublicForked from qupath/qupath
QuPath - Bioimage analysis & digital pathology
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Repositories
- Bulk-RNA-seq-pipeline-PE Public
- monailabel_cedar_app Public
- miniMTI Public
Code for a deep learning model capable of identifying optimal reduced CyCIF marker panels and imputing additional markers
- TITAN Public
Alex Chitsazan's package TITAN for scRNA-seq (Topic Inference of Transcriptionally Associated Networks), an unsupervised Bayesian topic modelling based approach utilizing Latent Dirichlet Allocation (LDA
- AMLClock Public
Snakemake workflows for analyzing DNA methylation. The first is for demultiplexing, trimming and aligning sequencing data. The second is for merging, deduplication and extracting methylation information.
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