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@at-cg

ATCG

Algorithmic Techniques for Computational Genomics

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  1. PanAligner PanAligner Public

    Long read aligner for cyclic and acyclic pangenome graphs

    C 40 4

  2. mm2-plus mm2-plus Public

    Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)

    C 36 2

  3. RAFT RAFT Public

    C++ 30 1

  4. minichain minichain Public

    Long-read aligner to pangenome graphs

    C 29 3

  5. billi billi Public

    Enumerating bubbles in pangenome graphs

    C++ 14

  6. PHI PHI Public

    Pangenome graph-based genome inference

    Python 13 1

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