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Using LLMs locally with Python

Basic pipeline using Nextflow to automate bulk RNAseq data preprocessing

Code accompanying the manuscript

Step by step analysis for variant calling and imputation from low-pass sequencing data

Analysis pipeline for single-cell RNAseq using both 10X genomics and Parse technologies

R package for systematic prioritization of GWAS loci using OpenTargets, IMPC, and TWAShub

This repository Includes python code to resolve Kaggle projects

nf based long-read RNAseq pipeline

Differential expression analysis of calvarial mouse osteoblasts

bash scripts for allele specific expression analysis

code for prepping snp and eqtl data for coloc and mirrorplot viz in bash and R