Explore and troubleshoot MHC client configs visually: discover relationships, surface missing context via secondary nodes, and drill into content without touching production. Runs on localhost and …

CA-2-HCOMB is a tool for simplifying single-chain protein structures from PDB files into manageable models like various honeycombs, retaining essential information for in-depth computations. It's e…

QuantumHoneycombPSP is a Python-based project designed to model protein structure prediction (PSP) using D-Wave quantum annealing. Uses novel protein lattices and energy functions.

Code for article "Investigating the potential for a limited quantum speedup on protein lattice problems" by Outeiral et al. (New Journal of Physics, 2021)

Quantum Annealing on 2D lattice protein folding with D'Wave's 2000Q Annealer

Code for the paper "Resource-efficient quantum algorithm for protein folding"

Finds the optimal stem configuration of an RNA sequence using the LeapHybridCQMSampler.

Config files for my GitHub profile.