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🧬 GPU-accelerated scRNA-seq & multi-omics pipeline + interactive dashboard 🚀📊

Python 4 Updated Dec 19, 2025

Flow cytometry analysis workflow. The aim of this project is to provide an intuitive workflow for the analysis of high-dimensionality cytometry data in R.

R 28 6 Updated Apr 29, 2026

SenePy is a set of tools to score single-cells based on their expression of cell-specific senescence markers. Please see the following publication By Sanborn MA et al in Nature Communications (2025…

Jupyter Notebook 60 8 Updated Jan 30, 2025

Geometry-preserving random sampling

Python 98 12 Updated Oct 29, 2024

A Bayesian model for compositional single-cell data analysis

Jupyter Notebook 203 27 Updated Jan 13, 2026

Flow & mass cytometry analytics.

Python 60 15 Updated Sep 21, 2026

A Python toolbox for quantitative, reproducible flow cytometry analysis

Python 226 61 Updated Jul 17, 2026

Save and load your R sessions faster using parallel compression

HTML 26 1 Updated Feb 13, 2019