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MAGs lives matter
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MAGs lives matter

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@bioconda @ohmeta @BioArchLinux

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12 results for source starred repositories written in C++
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An Open Source Machine Learning Framework for Everyone

C++ 192,848 75,128 Updated Dec 18, 2025

tools for working with genome variation graphs

C++ 1,270 210 Updated Dec 17, 2025

Accelerated BLAST compatible local sequence aligner.

C++ 1,218 185 Updated Dec 3, 2025

SPAdes Genome Assembler

C++ 883 156 Updated Dec 17, 2025

Bayesian haplotype-based genetic polymorphism discovery and genotyping.

C++ 857 270 Updated May 31, 2025

The second version of the Kraken taxonomic sequence classification system

C++ 855 296 Updated Dec 10, 2025

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

C++ 853 179 Updated May 29, 2024

A fast and sensitive gapped read aligner

C++ 758 172 Updated Nov 24, 2025

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

C++ 711 104 Updated Mar 18, 2025

Ultra-fast and memory-efficient (meta-)genome assembler

C++ 679 140 Updated Oct 28, 2025
C++ 131 51 Updated Jul 9, 2023

Massively parallel phylogenetic placement of genetic sequences

C++ 86 7 Updated Aug 23, 2022