-
-
versioned-md Public
Forked from NationalGenomicsInfrastructure/versioned-mdTemplate repository for individually versioned markdown documents.
Python MIT License UpdatedSep 8, 2026 -
genomics-status Public
Forked from NationalGenomicsInfrastructure/genomics-statusJavaScript MIT License UpdatedSep 7, 2026 -
dummy_documentation Public
Just a test repo for the documentation
Python MIT License UpdatedAug 25, 2026 -
StatusDB_NGI Public
Forked from NationalGenomicsInfrastructure/StatusDB_NGIHolds test data to fire up a dev instance of statusdb
Dockerfile MIT License UpdatedJun 26, 2026 -
demux_realm Public
Forked from NationalGenomicsInfrastructure/demux_realmHelper scripts for demultiplexing
Python MIT License UpdatedJun 26, 2026 -
standalone_scripts Public
Forked from NationalGenomicsInfrastructure/standalone_scriptsRepository to store standalone scripts that do not belong to any bigger package or repository
Python MIT License UpdatedMay 29, 2026 -
bertax Public
Forked from agrima2010/bertaxTaxonomic classification of DNA sequences
Python GNU General Public License v3.0 UpdatedMay 18, 2026 -
scilifelab_epps Public
Forked from NationalGenomicsInfrastructure/scilifelab_eppsA collection of Genologics Clarity LIMS EPPs used at Scilifelab.
Python UpdatedFeb 19, 2026 -
scilifelab-metadata-templates Public
Forked from ScilifelabDataCentre/scilifelab-metadata-templatesThis repository stores metadata templates in use at SciLifeLab, organized according to data type.
Python MIT License UpdatedDec 16, 2025 -
dataflow_transfer Public
Forked from NationalGenomicsInfrastructure/dataflow_transferTool for transferring data from NAS to HPC
Python UpdatedOct 22, 2025 -
TACA Public
Forked from NationalGenomicsInfrastructure/TACATool for the Automation of Cleanup and Analyses: tools for projects and data management at NGI Stockholm
Python MIT License UpdatedOct 2, 2025 -
Yggdrasil Public
Forked from NationalGenomicsInfrastructure/YggdrasilYggrasil is middleware platform designed to aggregate sample-related metadata, manage the execution of various pipelines for processing sequencing data, and ultimately handle the delivery of analyz…
Python MIT License UpdatedSep 24, 2025 -
ngi-firn Public
Forked from NationalGenomicsInfrastructure/ngi-firnA laboratory freezer inventory management system created with Nuxt3, Vue and UnaUI.
Vue MIT License UpdatedMay 9, 2025 -
fraguracy Public
Forked from brentp/fraguracyoverlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites
Rust MIT License UpdatedOct 28, 2024 -
anglerfish Public
Forked from NationalGenomicsInfrastructure/anglerfishCodename: Anglerfish
Python UpdatedSep 16, 2024 -
DailyRead Public
Forked from NationalGenomicsInfrastructure/DailyReadThe NGI Daily Read
Python UpdatedJun 13, 2024 -
statusdb Public
Forked from NationalGenomicsInfrastructure/statusdbPython wrappers and methods to work with CouchDB's instance at NGI Stockholm
Python MIT License UpdatedApr 26, 2024 -
StatusDB_tracer Public
Attempting to document which StatusDB views are used with static code analysis
Python MIT License UpdatedApr 19, 2024 -
seqinspector Public
Forked from nf-core/seqinspector(hopefully nf-core) pipeline to inspect your sequences
Nextflow MIT License UpdatedMar 20, 2024 -
test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedMar 19, 2024 -
MultiQC Public
Forked from MultiQC/MultiQCAggregate results from bioinformatics analyses across many samples into a single report.
Python GNU General Public License v3.0 UpdatedMar 1, 2024 -
spectacles Public
Forked from NationalGenomicsInfrastructure/spectaclesAPI for a clearer look at clarity
MIT License UpdatedFeb 20, 2024 -
-
-
parasail_alignment Public
Mostly a playground to generate and compare parasail alignments
Python UpdatedJan 12, 2024 -
NGI_dashboards Public
Forked from NationalGenomicsInfrastructure/NGI_dashboardsSciLifeLab NGI Dashboard Code
JavaScript MIT License UpdatedNov 16, 2023 -
LIMS2DB Public
Forked from NationalGenomicsInfrastructure/LIMS2DBPython MIT License UpdatedNov 9, 2023 -
benchmark_demultiplexing Public
Some scripts to benchmark demultiplexing on our NGI infrastructure
Python MIT License UpdatedOct 21, 2023 -
command_line_tips_and_tricks Public
A presentation of some useful tips and tricks
Shell UpdatedSep 29, 2023
{{ message }}