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1. PantheonOS PantheonOS Public

   A general, evolvable, and distributed agent framework & harness for data science.

   Python 442 58

2. dynamo-release dynamo-release Public

   Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

   Python 502 60

3. spateo-release spateo-release Public

   Spatiotemporal modeling of spatial transcriptomics

   Python 343 43

4. dynamo-tutorials dynamo-tutorials Public

   Tutorials on using latest dynamo package

   Jupyter Notebook 27 13

5. spateo-viewer spateo-viewer Public

   Web application demonstrating 3D modeling of spatial transcriptomics

   Python 24 7

6. tabula tabula Public

   Single cell foundation model with federated tabular learning

   Jupyter Notebook 32 4