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Simple test framework for Nextflow pipelines

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🚀 nf-test

Simple test framework for Nextflow pipelines

Installation

nf-test has the same requirements as Nextflow and can be used on POSIX compatible systems like Linux or OS X. You can install nf-test using the following command:

curl -fsSL https://code.askimed.com/install/nf-test | bash

If you don't have curl installed, you could use wget:

wget -qO- https://code.askimed.com/install/nf-test | bash

It will create the nf-test executable file in the current directory. Optionally, move the nf-test file to a directory accessible by your $PATH variable.

Conda

To install this package from Bioconda run the following command:

conda install -c bioconda nf-test

Note: this recipe is not maintained by us.

Usage

nf-test test example/*.nf.test

The full documentation can be found here.

Badge

Show the world your Nextflow pipeline is using nf-test:

nf-test

[![nf-test](https://img.shields.io/badge/tested_with-nf--test-337ab7.svg)](https://github.com/askimed/nf-test)

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