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sfon_pqtl Public
Code associated with the sex chromosome, heterochiasmy and phenotypic QTL manuscript
R UpdatedMay 21, 2017 -
2017_ms_immunostim Public
Associated code for analysis of 2017 manuscript immunostim
R UpdatedFeb 27, 2017 -
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mate-pair_QC Public
to quality trim, bin by MP/PE/Unkn, align to ref, estimate insert size.
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overlappingReads Public
used as a pipeline to quality trim, then collapse overlapping reads (e.g. paired-end where insert size is less than the length of R1 + R2)
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genomeSubsetAssemble Public
Used to map trimmed reads against a genome, subset for those mapping to specific contig/scaffold and prepare for assembly
Shell UpdatedAug 11, 2015
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