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Algorithms and Data Structures
Algorithms for DNA Sequencing
Algorithms for DNA Sequencing Johns Hopkins UniversityGWAS
Machine Learning
metagenome
Methylation
ML/DL
NGS
DNAseq/RNAseqStars
kubewall - Single-Binary Kubernetes Dashboard with Multi-Cluster Management & AI Integration. (OpenAI / Claude 4 / Gemini / DeepSeek / OpenRouter / Ollama / Qwen / LMStudio)
Precision HLA typing from next-generation sequencing data
Coroot is an open-source observability and APM tool with AI-powered Root Cause Analysis. It combines metrics, logs, traces, continuous profiling, and SLO-based alerting with predefined dashboards a…
Cache dependencies and build outputs in GitHub Actions
Find, install and publish Cloud Native packages
Ingress NGINX Controller for Kubernetes
Easy to maintain open source documentation websites.
Kubectl plugin to ease sniffing on kubernetes pods using tcpdump and wireshark
🐶 Kubernetes CLI To Manage Your Clusters In Style!
Resources (code, slides) for our GitHub Actions course (https://acad.link/gh-actions)
A bioinformatics pipeline to phase and impute genetic data
This project is an interactive web application designed to help aspiring Kubernetes security professionals prepare for certification exams. It features a comprehensive and adjustable mock exam with…
Fast, unopinionated, minimalist web framework for node.
Course resources for my "NextJS - The Complete Guide" course (https://acad.link/nextjs)
Publication-ready volcano plots with enhanced colouring and labeling
nf-core/references is a bioinformatics pipeline that build references, for multiple use cases
nf-core/demo is a simple nf-core style bioinformatics pipeline for workshops and demos.
Pipeline to fetch metadata and raw FastQ files from public databases
fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome
Repository for Dev Container Templates that are managed by Dev Container spec maintainers. See https://github.com/devcontainers/template-starter to create your own!
Finder of Somatic Fusion Genes in RNA-seq data
Kubernetes Handbook (Kubernetes指南) https://kubernetes.feisky.xyz
Example 📓 Jupyter notebooks that demonstrate how to build, train, and deploy machine learning models using 🧠 Amazon SageMaker.
A tool to map bisulfite converted sequence reads and determine cytosine methylation states