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8 stars written in Java
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《Hello 算法》:动画图解、一键运行的数据结构与算法教程。支持 Python, Java, C++, C, C#, JS, Go, Swift, Rust, Ruby, Kotlin, TS, Dart 代码。简体版和繁体版同步更新,English version in translation

Java 120,222 14,651 Updated Oct 30, 2025

Jenkins automation server

Java 24,778 9,253 Updated Dec 16, 2025

Official code repository for GATK versions 4 and up

Java 1,890 622 Updated Dec 15, 2025

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

Java 1,036 382 Updated Nov 13, 2025

cBioPortal for Cancer Genomics

Java 905 766 Updated Dec 15, 2025

Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

Java 707 400 Updated Dec 6, 2025

A quality control analysis tool for high throughput sequencing data

Java 557 105 Updated Dec 15, 2025

A Tool to Annotate and Prioritize Exome Variants

Java 232 57 Updated Dec 12, 2025