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@bioinfoUQAM

LaboBioInfoUQÀM

Laboratoire de Bio-Informatique de l'Université du Québec à Montréal

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  1. tgowler tgowler Public

    TGROWLeR system abstracts general patterns from workflow sequences previously extracted from texts. It comprises two modules –a workflow extractor and a pattern miner– both relying on a specific do…

    Java 3 2

  2. TOUCAN TOUCAN Public

    Supervised learning for fungal BGC discovery

    Python 6

  3. mirLibSpark mirLibSpark Public

    microRNA validation using Spark framework

    Java 3

  4. CASTOR_KRFE CASTOR_KRFE Public

    Alignment-free method to identify and analyse discriminant genomic subsequences within pathogen sequences

    Python 10 4

  5. evoVGM evoVGM Public

    Forked from maremita/evoVGM

    Evolutionary-based Variational Generative Model using Multiple Sequence Alignments

    Python 2

  6. Caribou Caribou Public

    Alignment-free bacterial identification and classification in metagenomics sequencing data using machine learning

    Python 3 1

Repositories

Showing 10 of 54 repositories
  • bioinfoUQAM/KmerSignificanceScore's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 22, 2026
  • Blurring_Person_CORCAN Public

    This script detects persons and heads in videos, tracks them across frames, fills short detection gaps by interpolation, and applies anonymization (pixelation by default) to every box. It’s built for robustness in crowded/occluded scenes and scales across multiple GPUs

    bioinfoUQAM/Blurring_Person_CORCAN's past year of commit activity
    Python 0 0 0 0 Updated Sep 1, 2026
  • bioinfoUQAM/bovine-behavior-inference's past year of commit activity
    0 0 0 0 Updated Aug 20, 2026
  • bioinfoUQAM/Forecasting_App's past year of commit activity
    Python 0 0 0 0 Updated Jul 7, 2026
  • fangio Public

    Adds movement indices to behavior experiment videos (matlab)

    bioinfoUQAM/fangio's past year of commit activity
    MATLAB 0 0 0 0 Updated Jun 11, 2026
  • bioinfoUQAM/AnnotationManualCorrection's past year of commit activity
    Python 0 0 0 0 Updated Jun 4, 2026
  • siWalk Public
    bioinfoUQAM/siWalk's past year of commit activity
    Python 0 MIT 1 0 0 Updated Jun 3, 2026
  • Registration-Modules Public

    Two modules for stall registration and bounding box alignment.

    bioinfoUQAM/Registration-Modules's past year of commit activity
    Python 0 0 0 0 Updated May 22, 2026
  • Stall-Point-Selection-Coordinate-Scaling Public

    Tool to interactively select the 4 corners of an animal stall on the first video frame, then normalize bounding box coordinates relative to the stall geometry.

    bioinfoUQAM/Stall-Point-Selection-Coordinate-Scaling's past year of commit activity
    Python 0 0 0 0 Updated May 22, 2026
  • Bounding-Box-Preprocessing Public

    Preprocessing modules for spatially filtering and reorganising cattle body-part detections prior to HMM-based behaviour analysis.

    bioinfoUQAM/Bounding-Box-Preprocessing's past year of commit activity
    Python 0 0 0 0 Updated May 22, 2026

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