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Starred repositories

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R/Pharma round tables agenda for 2024

4 3 Updated Aug 9, 2024

forked from mhammell-laboratory/tetoolkit to add function to reduce the TE read counts coming from pre-mrnas or retained introns

Python 2 1 Updated Dec 22, 2018

The Bio-Data Club at the Moffitt Cancer Center

HTML 14 12 Updated Dec 5, 2025

Analysis pipeline for the GUIDE-seq assay.

Python 30 18 Updated Aug 1, 2025

Nextflow training material for introductory tutorial

Nextflow 108 43 Updated May 13, 2022

Calculate DNA methylation age using Horvath 2013 method

R 4 4 Updated Aug 25, 2017

Standard Parker Lab ATAC-seq processing pipeline in Snakemake form

Python 8 1 Updated Feb 9, 2021

computational training at Fred Hutch

HTML 12 4 Updated Jun 11, 2021

Cookiecutter for snakemake slurm profile

Python 137 44 Updated Apr 25, 2024

Parallel computing with task scheduling

Python 1 Updated Feb 21, 2020
R 1 2 Updated Aug 15, 2018

Analysis of single cell RNA-seq data course

TeX 682 351 Updated Apr 11, 2022

PrediXcan Project

Python 121 59 Updated Oct 17, 2022