Skip to content

Updated how drift is calculated and how masking is done (Ready for review) #244

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
mihaic merged 53 commits into from
Nov 10, 2017
Merged

Updated how drift is calculated and how masking is done (Ready for review) #244

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
53 commits
Select commit Hold shift + click to select a range
e343763
Updated how drift is calculated and how masking is done
Jul 21, 2017
0faf6cc
PEP error
Jul 21, 2017
e005de2
Changed how cycles are calculated for drift
Jul 22, 2017
f6cefea
PEP error and updated doc
Jul 22, 2017
1cd0d8a
PEP error
Jul 22, 2017
a4921d9
Updated doc string of most functions to be more clear. Combined _calc…
Jul 23, 2017
2cc3c01
PEP errors
Jul 23, 2017
0c6a7dc
PEP error
Jul 23, 2017
f7e7780
PEP error
Jul 23, 2017
75a7225
PEP error
Jul 23, 2017
f029527
Refactoring error
Jul 23, 2017
7641293
Simplified masking by distinguishing between a binary mask and a cont…
Jul 25, 2017
1734731
PEP error
Jul 25, 2017
01ffab2
Updated to deal with changes in fmrisim
Jul 25, 2017
5571d67
Mask_brain wasn't working for mask self
Jul 25, 2017
f3da033
Added automatic mask thresholding. Added (default) option of exponent…
Jul 28, 2017
c59f2d1
PEP errors
Jul 28, 2017
da5cb48
Relaxed test constraint since it is sometimes inaccurate with this ma…
Jul 28, 2017
ed42b44
Extensive update. Changed how noise is calculated, now it is focused …
Sep 21, 2017
4e247c9
Merge branch 'master' into fmrisim_mean_mask
Sep 21, 2017
db4b06f
PEP errors
Sep 21, 2017
bab3c9f
Merge branch 'fmrisim_mean_mask' of https://github.com/CameronTEllis/…
Sep 21, 2017
27c70d6
PEP errors
Sep 22, 2017
65728c7
Updated fmrisim to accept any specified hrf. Changed utils to deal wi…
Sep 22, 2017
43dd580
PEP error
Sep 22, 2017
1a4bad4
PEP error
Sep 22, 2017
99f10d1
PEP Error
Sep 22, 2017
c1b65c4
Rounding error
Sep 22, 2017
15d22a3
Dimension error
Sep 22, 2017
f366c2a
Changed rounding procedure for Stimfunction
Sep 22, 2017
39577ea
More hacky fix
Sep 22, 2017
1f7c63e
Error
Sep 22, 2017
a8ed4ec
Error
Sep 22, 2017
ecccdda
Updated the export functions so as to support making both 3 column fi…
Sep 24, 2017
531d868
PEP error
Sep 24, 2017
c5a238e
PEP error
Sep 24, 2017
255c169
Fixed error with gamma_hrf assuming the temporal resolution
Oct 5, 2017
7bfa9c4
Improved the peak detection of the masking function
Oct 14, 2017
25fcb32
PEP error
Oct 14, 2017
6ef7d40
Improved the calculation of SNR
Oct 15, 2017
95cce26
Simplified the calculation of SNR
Oct 16, 2017
6de8564
Updated how system noise is calculated to be more realistic. Improved…
Oct 18, 2017
d9b2723
PEP error
Oct 18, 2017
ecb0d83
PEP error
Oct 18, 2017
4fdab7f
PEP error
Oct 19, 2017
b1a4c3d
PEP error
Oct 19, 2017
8b5762d
Initial commit of fmrisim multivariate jupyter notebook
Oct 21, 2017
e3ec414
Updated with comments from (fantastic) Chris and Mingbo
Nov 9, 2017
faa3f03
PEP errors
Nov 9, 2017
37425be
Updated documentation for example notebook
Nov 9, 2017
56ca105
Updated the code for Mingbo's comments
Nov 9, 2017
298cf2d
Changed AR default
Nov 10, 2017
6f6019c
Merge branch 'master' into fmrisim_mean_mask
Nov 10, 2017
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Loading