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Quick mapping of Uniprot sequences to PDB structures

Python 36 5 Updated Apr 1, 2025

How to analyze molecular dynamics data with PyEMMA

Jupyter Notebook 88 34 Updated May 29, 2019

Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation

Python 881 88 Updated Jun 26, 2026

Foldseek enables fast and sensitive comparisons of large structure sets.

C 1,279 156 Updated Aug 11, 2026
Jupyter Notebook 18 1 Updated Aug 28, 2023

๐Ÿš‚ Python API for Emma's Markov Model Algorithms ๐Ÿš‚

Python 340 128 Updated Sep 11, 2023

Code for running RFdiffusion

Python 3,011 633 Updated Jul 15, 2026
Jupyter Notebook 5 1 Updated Jun 11, 2021