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Use lowercase OME-NGFF axis names (t, c, z, y, x) by default
area: ngffOME-NGFF metadata, spec compliance, collectionsOME-NGFF metadata, spec compliance, collectionsbreakingBreaking changeBreaking changeStatus: Open.#477 In czbiohub-sf/iohub;- Status: Open.#471 In czbiohub-sf/iohub;
Copy custom metadata between existing OME-Zarr Positions
area: cliCommand-line interfaceCommand-line interfaceStatus: Open.#469 In czbiohub-sf/iohub;- Status: Open.#458 In czbiohub-sf/iohub;
Add MRC-to-OME-Zarr Conversion
area: readersFormat readers, converters, data ingestFormat readers, converters, data ingestarea: zarrZarr integration, storage backends (zarr-python/tensorstore/zarrs)Zarr integration, storage backends (zarr-python/tensorstore/zarrs)design discussionNeeds design input before implementationNeeds design input before implementationStatus: Open.#457 In czbiohub-sf/iohub;Investigate Zarrista
area: zarrZarr integration, storage backends (zarr-python/tensorstore/zarrs)Zarr integration, storage backends (zarr-python/tensorstore/zarrs)Status: Open.Consolidated Metadata
area: zarrZarr integration, storage backends (zarr-python/tensorstore/zarrs)Zarr integration, storage backends (zarr-python/tensorstore/zarrs)Status: Open.#435 In czbiohub-sf/iohub;Update CI to use ODIC Trusted Publishing
ciContinuous integrationContinuous integrationStatus: Open.#428 In czbiohub-sf/iohub;Downsampling for Labels
area: ngffOME-NGFF metadata, spec compliance, collectionsOME-NGFF metadata, spec compliance, collectionsarea: zarrZarr integration, storage backends (zarr-python/tensorstore/zarrs)Zarr integration, storage backends (zarr-python/tensorstore/zarrs)design discussionNeeds design input before implementationNeeds design input before implementationStatus: Open.#423 In czbiohub-sf/iohub;WARNING:iohub.ngff.nodes:Cannot read first position metadata.
area: ngffOME-NGFF metadata, spec compliance, collectionsOME-NGFF metadata, spec compliance, collectionsStatus: Open.Update
Position.create_zeroswith better defaults for chunks and shardsarea: zarrZarr integration, storage backends (zarr-python/tensorstore/zarrs)Zarr integration, storage backends (zarr-python/tensorstore/zarrs)Status: Open.#409 In czbiohub-sf/iohub;- Status: Open.#402 In czbiohub-sf/iohub;