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electricShine Public archive
Create Standalone Installable Shiny Apps
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MassQueryLanguage Public
Forked from mwang87/MassQueryLanguageThe Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry centric fashion.
Python MIT License UpdatedFeb 23, 2025 -
foldseek Public
Forked from steineggerlab/foldseekFoldseek enables fast and sensitive comparisons of large structure sets.
C GNU General Public License v3.0 UpdatedFeb 3, 2025 -
IDBacApp Public
A MALDI Mass Spectrometry Bioinformatics Platform
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bigslice Public
Forked from medema-group/bigsliceA highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data
Python GNU Affero General Public License v3.0 UpdatedNov 20, 2024 -
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open-data-registry Public
Forked from awslabs/open-data-registryA registry of publicly available datasets on AWS
Python Apache License 2.0 UpdatedOct 28, 2024 -
egfr_competition_1 Public
Forked from adaptyvbio/egfr_competition_1This repo contains the results data for Adaptyv Bio’s EGFR Protein Design Competition.
Python UpdatedSep 25, 2024 -
ComputationalGenomicsManual Public
Forked from linsalrob/ComputationalGenomicsManualRobs manual for the computational genomics and bioinformatics class.
HTML MIT License UpdatedAug 19, 2024 -
Melodia_py Public
Forked from rwmontalvao/Melodia_pyProtein Structure Analysis
Python Apache License 2.0 UpdatedJul 30, 2024 -
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ProteinWorkshop Public
Forked from a-r-j/ProteinWorkshopBenchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models and training/task utilities. (ICLR 2024)
Python MIT License UpdatedMar 27, 2024 -
esm Public
Forked from facebookresearch/esmEvolutionary Scale Modeling (esm): Pretrained language models for proteins
Python MIT License UpdatedFeb 7, 2024 -
teachopencadd Public
Forked from volkamerlab/teachopencaddTeachOpenCADD: a teaching platform for computer-aided drug design (CADD) using open source packages and data
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job-grant-statements Public
Forked from RILAB/statementsSuccessful Job Applications and Grants
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uw-scripts Public
Random helper scripts written while postdoc'ing at UW-Madison
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ProteinCartography Public
Forked from Arcadia-Science/ProteinCartographya pipeline to build similarity maps of protein space
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stamps2023 Public
Forked from mblstamps/stamps2023Materials for the STAMPS 2023 course at the MBL in Woods Hole, MA, USA
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learngenomics.dev Public
Forked from stjude/learngenomics.devA guided, intuitive introduction to genomics for software engineers. Curated by the community.
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ncbi-genome-download Public
Forked from kblin/ncbi-genome-downloadScripts to download genomes from the NCBI FTP servers
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ZamanianLabDocs Public
Forked from zamanianlab/ZamanianLabDocs -
autometa_test_data Public
Minimal data for testing the Autometa workflow
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computational_biology Public
Forked from fayjustin/computational_biologycourse material
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