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27 stars written in R
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cowplot: Streamlined Plot Theme and Plot Annotations for ggplot2

R 749 84 Updated Jul 7, 2025

Column scatter / beeswarm-style plots in ggplot2

R 561 34 Updated Nov 29, 2025

Dictionary based sentiment analysis that considers valence shifters

R 438 85 Updated Aug 6, 2023

Widen, process, and re-tidy a dataset

R 332 29 Updated Nov 10, 2022

Sparse InversE Covariance estimation for Ecological Association and Statistical Inference

R 222 70 Updated Oct 29, 2025

R package for microbiome biomarker discovery

R 192 41 Updated Feb 19, 2025

🦠 A comprehensive R package for deep mining microbiome

R 190 36 Updated Nov 3, 2025

Workshop exercises on regression, GLMs, mixed-effects models, and GLMMs in R

R 187 66 Updated Aug 12, 2025

Alluvial diagrams

R 145 26 Updated Dec 13, 2021

Detailed Visualization of Large Complex Data in R

R 115 33 Updated Apr 8, 2017

The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of mass spectrometry (MS) omics data, in particular proteomic (ei…

R 48 18 Updated Oct 22, 2025

Speedy versions of phyloseq functions

R 48 6 Updated Apr 21, 2024

Render R Markdown outputs lazily

R 43 1 Updated Aug 20, 2018

Zero-Inflated Beta Random Effect model

R 31 9 Updated Oct 17, 2023

manage ordinations and render biplots in a tidyverse workflow

R 25 5 Updated Sep 10, 2025

A gui overlay and extension for MSGFplus

R 10 6 Updated Apr 3, 2017
R 7 1 Updated Nov 21, 2025

Package R pour communiquer avec une api Grist

R 7 1 Updated Jul 28, 2025

An MSGF+ interface for R

R 7 6 Updated Sep 28, 2024

For when your colors absolutely should not be excluded from the narrative.

R 4 1 Updated Nov 11, 2025

A terse syntax of function declaration in R. 🔫

R 3 Updated Mar 28, 2018

Modified RASflow to run on the cluster

R 2 Updated Apr 13, 2020
R 2 3 Updated Jun 13, 2024
R 2 Updated Jul 10, 2017

This is code and data associated with strain manuscript "The complete genome and physiological analysis of the eurythermal firmicute Exiguobacterium chiriqhucha strain RW2 isolated from a freshwate…

R 2 Updated Dec 10, 2018

Data and R code for the manuscript: Temporal variability of microbial response to crude oil exposure in the northern Gulf of Mexico

R 1 Updated Jan 12, 2023