All pull requests

Pull requests

• fix(xarray): keep the applied key as identity in apply_affine

  bug
  #463·FelipeCybis opened Sep 18, 2026·

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  1

  8

  

• ci: update pre-commit hooks

  dependencies
  #450·github-actions[bot] opened Sep 3, 2026·

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  2

• feat(atlas): multi-region get_mesh and batched atlas mesh prefetch

  enhancement
  #448·FelipeCybis opened Sep 2, 2026·2/3·

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  3

  

• feat(xarray): add get_bounding_box and speed up atlas mesh clipping

  enhancement
  #446·FelipeCybis opened Sep 1, 2026·1/3·

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  1

  3

  

• fix(plotting): honor a lone vmin or vmax under auto_range

  bug
  #445·FelipeCybis opened Sep 1, 2026·

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  1

  3

  

• perf(glm): make GLM fit faster

  bugenhancement
  #442·FelipeCybis opened Sep 1, 2026·

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  1

  3

  

• feat(registration)!: replace joblib with Dask in register_volumewise

  enhancement
  #440·sdiebolt opened Sep 1, 2026·

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  1

  3

  

• feat(napari): register within-scan frames to a fixed layer

  enhancement
  #437·FelipeCybis opened Sep 1, 2026·2/2·

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  3

  

• feat(registration): accept any fixed volume in register_volumewise

  enhancement
  #436·FelipeCybis opened Sep 1, 2026·1/2·

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  1

  5

  

• feat(napari): add Preprocessing panel

  enhancement
  #435·sdiebolt opened Sep 1, 2026·

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  2

  

• feat(napari): responsive mouse source + pinnable signals

  enhancement
  #429·sdiebolt opened Aug 31, 2026·

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  1

  6

  

• fix(timing): reject pose-dependent time coordinates in resampling

  bug
  #424·sdiebolt opened Aug 29, 2026·

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  1

  4

  

• feat(nifti): add from_nifti/to_nifti in-memory nibabel conversion

  enhancement
  #421·sdiebolt opened Aug 28, 2026·

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  1

  2

  

• feat(registration): add auto interpolation to resample_volume/resample_like

  enhancement
  #420·sdiebolt opened Aug 28, 2026·

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  1

  1

  

• fix(registration): cap default slice count in registration progress plot

  bug
  #419·sdiebolt opened Aug 28, 2026·

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  1

  1

  

• feat(validation): accept binary numeric masks, not just boolean/integer

  enhancement
  #418·sdiebolt opened Aug 28, 2026·

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  1

  1

  

• fix(multipose): loosen consolidate_poses regularity check for small steps

  bug
  #417·sdiebolt opened Aug 28, 2026·

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  1

  3

  

• perf(atlas): keep template/annotation lazy as Dask arrays

  enhancement
  #415·sdiebolt opened Aug 28, 2026·2/2·

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  2

  

• fix(plotting): phase-lock add_volume's in-plane display grid across volumes

  #393·sdiebolt opened Aug 25, 2026·

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  1

  2

  

• feat: add live volumewise registration plots

  enhancement
  #352·sdiebolt opened Jul 31, 2026·

  ·
  1

  4

  

• feat(plotting): improve matplotlib plot sizing and colorbars

  enhancement
  #338·sdiebolt opened Jul 21, 2026·

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  1

  2

  

• feat(plotting): add plot_surface for displaying meshes in napari

  #263·FelipeCybis opened Jul 7, 2026·3/3·

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  2

  2

  

• feat(connectivity): add CAP analysis

  enhancement
  #116·sdiebolt opened May 12, 2026·

  ·
  1

  9