Collection of Python and other data analysis resources

CORNETO: A Unified Omics-Driven Framework for Network Inference

LIANA+: an all-in-one framework for cell-cell communication

LIANA: a LIgand-receptor ANalysis frAmework

A lightweight, modern and flexible, log4j and futile.logger inspired logging utility for R

Persistent HTTP cache for python requests

📒 Sphinx source parser for Jupyter notebooks

A collection of various notebook extensions for Jupyter

R package to infer biological activities from omics data using a collection of methods.

✳️ Unexport is a linter that tries to keep the __all __ in your Python modules always up to date.

R package for metabolic enzyme enrichment anaylsis

R package for Pathway RespOnsive GENe activity inference

Multiview Intercellular SpaTial modeling framework

CAusal Reasoning for Network Identification with integer VALue programming in R

COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.

A collection of BIOS/EC patches for the X2100

renv: Project environments for R.

Automatische Terminbuchung für den Corona Impfterminservice.

PROGENY Python implementation

NATMI: Network Analysis Toolkit for the Multicellular Interactions

Python interface for igraph

Python package to read and write R RData and Rds files into/from pandas dataframes. No R or other external dependencies required.

Collection of Python functions and classes designed to make data scientists' life easier.

A cookiecutter bio2bel repositories

Library for developers to extract data from Microsoft Excel (tm) spreadsheet files

A fast, extensible progress bar for Python and CLI