Manipulate and generate figures for trees in Newick format

Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and …

The world’s fastest framework for building websites.

Accurate Species Tree EstimatoR: a family of optimation algorithms for species tree inference (including ASTRAL & CASTER)

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

Porting Grav Learn theme to Hugo

Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)

Curated list of bioinformatics formats and publications

Building SuperTranscripts: A linear representation of transcriptome data

Coding Genome Reconstruction using Iso-Seq data

A tool to identify, orient, trim and rescue full length cDNA reads

Versatile open-source tool for microbiome analysis

R course in Ilhabela, Brazil, June 2015

Simple program for in silico restriction digest of genomic sequences, to simulate RAD-family NGS library prep methods

NOVOPlasty - The organelle assembler and heteroplasmy caller

Interactive assembly and analysis of RAD-seq data sets

Assembly and analysis of RADseq data sets

A package for population structure inference from RAD-seq data