Open Source alternative to Algolia + Pinecone and an Easier-to-Use alternative to ElasticSearch ⚡ 🔍 ✨ Fast, typo tolerant, in-memory fuzzy Search Engine for building delightful search experiences

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

Genome browser and variant annotation

Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly

Short-read and long-read sequencing tools for diagnostics

Low Coverage Calling of Genotypes

Segmented HAPlotype Estimation and Imputation Tool

vcfdist: Accurately benchmarking phased variant calls

Genotype Representation Graph Library

The Flexible Demultiplexer

Improving gene isoform quantification with miniQuant

This tools counts the number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to compute the probability that sample are of the same origin to di…

Multithreaded read analysis

v2.x of the microassembly based somatic variant caller

xSqueezeIt VCF/BCF Genotype data compressor with extensible compute friendly format

This is the software for FAst Marginal Epistasis test (FAME)