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Starred repositories
⚡ Dynamically generated stats for your github readmes
Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.
📝A simple and elegant markdown editor, available for Linux, macOS and Windows.
A simple, in-browser, markdown-driven slideshow tool.
RegExr is a HTML/JS based tool for creating, testing, and learning about Regular Expressions.
CodiMD - Realtime collaborative markdown notes on all platforms.
A web interface to create custom vector-based visualizations on top of RAWGraphs core
Chat with your notes & see links to related content with AI embeddings. Use local models or 100+ via APIs like Claude, Gemini, ChatGPT & Llama 3
Authoring Books and Technical Documents with R Markdown
A minimal Jekyll Theme to host your resume (CV) on GitHub with a few clicks.
PDF exporter for HTML presentations
Minimal and formal résumé (CV) website template for print, mobile, and desktop.
Zotero plugin providing some additional editing features
Aggregate results from bioinformatics analyses across many samples into a single report.
The lecture slides for Coursera's Data Analysis class
Interactively explore metagenomes and more from a web browser.
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
Fast, flexible and extensible genome browser.
Fast genome analysis from unassembled short reads
A genome browser designed for complex structural variants and long reads.
Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)