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  1. stochastix stochastix Public

    Differentiable, GPU-accelerated stochastic kinetic models in JAX.

    Jupyter Notebook 3

  2. jax-morph jax-morph Public

    Simulation and optimization of cell clusters.

    Jupyter Notebook 12 1

  3. bibmonkey bibmonkey Public

    Quick and dirty reference existence checker.

    Python

  4. Harvard-AM115-2024 Harvard-AM115-2024 Public

    Notebooks and materials for Harvard AM115 course on mathematical modeling.

    Jupyter Notebook 4 1

  5. stochastix-paper stochastix-paper Public

    Reproducibility code for "Gradient-based optimization of exact stochastic kinetic models"

    Jupyter Notebook